BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB006C01SP1|AL425492
(948 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1030 1464 0.0
>3x_Contig1030
Length = 5200
Score = 1464 bits (738), Expect = 0.0
Identities = 738/738 (100%)
Strand = Plus / Minus
Query: 1 atcaggatctgctgtcgggttaactagtggatatggtcaatctaaatgggccgccgaata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 750 atcaggatctgctgtcgggttaactagtggatatggtcaatctaaatgggccgccgaata 691
Query: 61 tatcataagaagagcgggggagcgtggtcttcgcggctgcattgttagaccaggttatgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 tatcataagaagagcgggggagcgtggtcttcgcggctgcattgttagaccaggttatgt 631
Query: 121 taccggtgcctcatccaatgggtcgtccaatactgatgatttcttgttaagattcttaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 taccggtgcctcatccaatgggtcgtccaatactgatgatttcttgttaagattcttaaa 571
Query: 181 gggggtggtacagttgggtcaaatccctaacatcagcaacacagttaatatggtacctgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 gggggtggtacagttgggtcaaatccctaacatcagcaacacagttaatatggtacctgt 511
Query: 241 tgatcatgtagcacgtgttgtaacagccagtgctttcaatcctcctaacgaacatgagct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 tgatcatgtagcacgtgttgtaacagccagtgctttcaatcctcctaacgaacatgagct 451
Query: 301 agctgttgcacatgtaacgggccatccgcgtatcctattcaaagattatctataccaatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 agctgttgcacatgtaacgggccatccgcgtatcctattcaaagattatctataccaatt 391
Query: 361 gaagaagtatggctacaacgttgaaattcaagaatatgcagactggaagttatctcttga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 gaagaagtatggctacaacgttgaaattcaagaatatgcagactggaagttatctcttga 331
Query: 421 acattctgtaatcgcaagaggtgaagataatgccttgtatccattgttacatatggtatt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 acattctgtaatcgcaagaggtgaagataatgccttgtatccattgttacatatggtatt 271
Query: 481 ggatggcttagcggagaacaccagggctcctgaattagatgatacaaatgcgacttcatc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 ggatggcttagcggagaacaccagggctcctgaattagatgatacaaatgcgacttcatc 211
Query: 541 cttgcaaaaagataaaaaatggacaggtgttgacgtttcttcagggaaaggagctacccc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 cttgcaaaaagataaaaaatggacaggtgttgacgtttcttcagggaaaggagctacccc 151
Query: 601 agaacaaatcggtatttatattgcctttttgaataaggtaggctttttgcctcctccacc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 agaacaaatcggtatttatattgcctttttgaataaggtaggctttttgcctcctccacc 91
Query: 661 aacgactggtgaattgaatttacctcaaatatcattgtctgaagagcaaatcaagctagt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 90 aacgactggtgaattgaatttacctcaaatatcattgtctgaagagcaaatcaagctagt 31
Query: 721 ttcttcaggagctggtgc 738
||||||||||||||||||
Sbjct: 30 ttcttcaggagctggtgc 13
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6764
Number of Sequences: 1807
Number of extensions: 6764
Number of successful extensions: 44
Number of sequences better than 1.0e-20: 1
length of query: 948
length of database: 10,358,551
effective HSP length: 16
effective length of query: 932
effective length of database: 10,329,639
effective search space: 9627223548
effective search space used: 9627223548
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)